rs255272 chr19:29872319 C>G
- Sequence
gcgcccaagcgggggcagtgcagc[C/G]cctgctccccgcccgcgggtgcct
- ASB in cell types
- GM18505 (female B-cells Lymphoblastoid Cell Lines) spleen GM18486 (Lymphoblastoid Cell Lines) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.53 | 2.18 | 1.36 | n/a | No Hit |
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