rs2561217 chr5:65835477 G>A

Sequence
gaacaatgggctgtattgtaatta[G/A]gataagggaactaaagctccatgt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
SOX6_HUMAN MTG16_HUMAN MEIS2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SOX6_HUMAN n/a 3.98 1.001.2·10-10 2.00 n/a n/a
MTG16_HUMAN -5.22 3.04 1.002.8·10-3 2.00 n/a n/a
MEIS2_HUMAN -1.74 2.67 1.000.03 2.00 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration
GTEx eQTL Adipose_Subcutaneous Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Whole_Blood

Download