ADASTRA v5.1.3
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rs2561217
chr5:65835477
G
>
A
Sequence
gaacaatgggctgtattgtaatta[G/A]gataagggaactaaagctccatgt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
SOX6_HUMAN
MTG16_HUMAN
MEIS2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SOX6_HUMAN
n/a
3.98
1.00
1.2·10
-10
2.00
n/a
n/a
MTG16_HUMAN
-5.22
3.04
1.00
2.8·10
-3
2.00
n/a
n/a
MEIS2_HUMAN
-1.74
2.67
1.00
0.03
2.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
GTEx eQTL
Adipose_Subcutaneous
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)