rs257387 chr7:107168035 G>A
- Sequence
agcatactaatcagtatggaaaat[G/A]ccgctttaacttgcctcaatttcg
- ASB in cell types
- K562 (myelogenous leukemia) primary B-CLL cells monocytes from periferal blood
- ASB for transcription factors
- EWS_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EWS_HUMAN | n/a | 2.76 | 1.00 | n/a | n/a | |||
| SRBP2_HUMAN | 2.56 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, hdl cholesterol, ldl cholesterol
GTEx eQTL Artery_Tibial, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Colon_Sigmoid, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis