rs257701 chr5:124402229 G>A
- Sequence
taaagtgttctgaccagatgactc[G/A]gcattgccagtaagaacccagccc
- ASB in cell types
- CFPAC-1(pancreatic ductal adenocarcinoma) primary endometrium cancer pancreatic ductal adenocarcinoma
- ASB for transcription factors
- FOXA2_HUMAN FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | -0.83 | 2.41 | 1.07 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.88 | 1.70 | 1.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.71 | -0.56 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, bipolar disorder, body mass index (bmi), tardive dyskinesia, triglycerides change with statins, urinary albumin-to-creatinine ratio
GTEx eQTL Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg