rs258879 chr5:16418720 G>A

Sequence
atgccatttaatgtgcctggggcc[G/A]ccgataactgatagcactccacta
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MTG16_HUMAN MTG8R_HUMAN TIF1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTG16_HUMAN 0.23 -0.23 9.9·10-31.00 1.00 n/a n/a
MTG8R_HUMAN 0.29 -0.29 0.021.00 1.00 n/a n/a
TIF1B_HUMAN 1.84 -0.42 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight hdl cholesterol hypertension (early onset hypertension) mitral annular calcium stabilized warfarin dose
GTEx eQTL Artery_Aorta

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