rs25923 chr5:111461400 A>G
- Sequence
gcacttaatctcctgaactggggc[A/G]ttatctttttatcaaatcaaaaat
- ASB in cell types
- RWPE2 bipolar neuron GM02610 (Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.38 | 0.54 | 1.07 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP arthritis including non-rheumatoid, homa-b, longstanding arthritis, rheumatoid arthritis, transmission distortion, variant creutzfeldt-jakob disease