rs260114 chr15:99143900 T>C
- Sequence
gtgagtgattaaataggacaaaca[T/C]gtaagctggggagattcttacatg
- ASB in cell types
- sigmoid colon
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| sigmoid colon | -1.12 | 1.71 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Hippocampus, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Esophagus_Muscularis, Muscle_Skeletal, Pituitary, Spleen, Testis, Thyroid