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rs260672 chr2:109002117 A>G

Sequence
gccatttgctgccccttgtgtccc[A/G]tggctgcactgcacccttgctgtc
ASB in cell types
D54 (H54, Human glioblastoma) erythroid progenitors GM02630 (Fanconi anemi)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
D54 (H54, Human glioblastoma) -1.11 2.34 1.005.6·10-3 2.00
erythroid progenitors 2.26 n/a 0.021.00 2.50
GM02630 (Fanconi anemi) -0.84 1.08 1.000.02 1.00
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol
GTEx eQTL Colon_Sigmoid Esophagus_Mucosa

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