rs261307 chr15:58361621 A>G
- Sequence
gccaccaggagcaagtcttgttgc[A/G]aaatgtccagaaatgcccaaacag
- ASB in cell types
- MDM(monocyte derived macrophages) macrophages form periferal blood MOLM-13(acute monocytic leukemia(AML), Homo sapiens) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- SPI1_HUMAN TF65_HUMAN STAT1_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.23 | 2.75 | 1.65 | n/a | No Hit | |||
| TF65_HUMAN | n/a | 3.68 | 2.50 | n/a | No Hit | |||
| STAT1_HUMAN | n/a | 2.22 | 3.00 | n/a | No Hit | |||
| CEBPA_HUMAN | -4.89 | 2.92 | 1.50 | -2.07 | Discordant | |||
| CDK8_HUMAN | 0.03 | 1.74 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP college completion, hip bone mineral density (bmd), mitral annular calcium, rheumatoid arthritis, tetrology of fallot