rs26162 chr5:11506707 G>A
- Sequence
ttttttaaaagataaacatttatt[G/A]taaacactatgaggcatgcccagg
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.24 | 0.73 | 3.31 | -1.32 | Weak Concordant |
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Motif analysis
