rs2618567 chr20:17863848 G>T
- Sequence
tggaaaatccagggaccatcccag[G/T]cccagctgcgctccaggaagaaac
- ASB in cell types
- HepG2 (hepatoblastoma) liver
- ASB for transcription factors
- TEAD3_HUMAN ZBT26_HUMAN CEBPG_HUMAN SUH_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TEAD3_HUMAN | 4.46 | -4.45 | 1.00 | n/a | n/a | |||
| ZBT26_HUMAN | 3.30 | -2.98 | 1.00 | n/a | n/a | |||
| CEBPG_HUMAN | 4.03 | -4.37 | 1.00 | n/a | No Hit | |||
| SUH_HUMAN | 3.61 | n/a | 1.00 | n/a | No Hit | |||
| FOXA3_HUMAN | 3.64 | -5.11 | 1.33 | n/a | No Hit |
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Motif analysis
