rs2619140 chr12:101539382 T>C
- Sequence
cagggaaagccaagaagaattgca[T/C]aacactatcagttatctggggaag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- CEBPB_HUMAN HLF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 0.47 | 2.44 | 1.40 | 1.13 | Weak Concordant | |||
| HLF_HUMAN | 2.54 | -4.49 | 1.50 | -2.31 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
