rs263458 chr1:86774394 A>G

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 1.89 n/a 7.3·10-51.00 2.33 n/a No Hit
EGR1_HUMAN 2.13 -0.61 1.2·10-30.99 2.00 -3.14 Concordant
STAT1_HUMAN 1.44 n/a 6.7·10-31.00 3.00 n/a No Hit
CEBPB_HUMAN 1.45 0.07 0.020.89 1.81 n/a No Hit
SP130_HUMAN 2.49 -2.22 0.021.00 1.00 n/a n/a
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Motif analysis

EGR1_HUMAN Concordant
EGR1_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Caudate_basal_ganglia Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Mucosa Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid

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