rs2638885 chr12:40511365 T>A
- Sequence
tgccatctctcgagcatatttatt[T/A]tacttcttgtttatttcgtgtttt
- ASB in cell types
- GM19099 (female B-cells Lymphoblastoid Cell Lines) GM18526 (B – cells Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.27 | 1.45 | 1.59 | n/a | No Hit | |||
| STAG1_HUMAN | 1.20 | 1.94 | 1.81 | n/a | n/a |
Items per page:
1 – 2 of 2