rs2645643 chr1:110150641 C>T
- Sequence
ctctctccgccgtgggacctgggt[C/T]cccgcgccgctcccctgagccccg
- ASB in cell types
- HEK293 (embryonic kidney) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ZN600_HUMAN ZBT26_HUMAN SP2_HUMAN GCR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN600_HUMAN | n/a | 2.96 | 2.00 | n/a | n/a | |||
| ZBT26_HUMAN | n/a | 0.77 | 2.00 | n/a | n/a | |||
| SP2_HUMAN | n/a | 2.72 | 2.00 | -1.36 | Weak Discordant | |||
| GCR_HUMAN | -0.90 | 1.95 | 1.00 | n/a | No Hit |
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Motif analysis
