rs2647537 chr11:9103754 T>C
- Sequence
gcagagacccgctttcttctgtgg[T/C]cactgtggctgttgccacagtctt
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| LNCaP C4-2B (prostate carcinoma) | -0.80 | 1.64 | 1.00 |
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Motif analysis
No data available
Genetic associations
GRASP childhood acute lymphoblastic leukemia, infant head circumference, primary rhegmatogenous retinal detachment
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood