rs2656363 chr17:16818952 C>T
- Sequence
gggccaagactcattgggcatcct[C/T]gccctccagcaggcggcggtaggt
- ASB in cell types
- GM18526 (B – cells Lymphoblastoid Cell Lines) Peyer's patch
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.23 | 1.62 | 1.72 | 0.14 | Weak Concordant |
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Motif analysis
