ADASTRA v5.1.3
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rs266650
chr12:54759867
A
>
T
Sequence
agggtatgtttgctatggggtaat[A/T]tttagctgcctgttggtctcctta
ASB in cell types
IPSC-derived bipolar neuron
PANC1 (pancreatic ductal adenocarcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
IPSC-derived bipolar neuron
1.19
-0.99
0.02
1.00
1.00
PANC1 (pancreatic ductal adenocarcinoma)
-3.06
1.48
1.00
0.05
2.00
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5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
ldl cholesterol
,
lp-pla2 activity
,
microalbuminuria
GTEx eQTL
Brain_Cortex
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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