rs2682314 chr12:52874432 G>A
- Sequence
ccggcctcttcccaccccagaccc[G/A]cccgctaagccgggagagcctgac
- ASB in cell types
- K562 (myelogenous leukemia) CTV-1 (Adult T acute lymphoblastic leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- CTBP1_HUMAN IKZF1_HUMAN SMCA4_HUMAN VEZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTBP1_HUMAN | n/a | 2.88 | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | 0.63 | 1.93 | 1.62 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.04 | 2.01 | 1.29 | n/a | n/a | |||
| VEZF1_HUMAN | -4.29 | 1.94 | 2.00 | n/a | No Hit | |||
| ARI1B_HUMAN | n/a | 1.20 | 2.00 | n/a | n/a |
Items per page:
1 – 5 of 12
Motif analysis
