rs2696455 chr17:46206205 C>T

Sequence
ttgatctacagaatcaatgtgatc[C/T]cagcatacccaaaagaaatttgaa
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) 22RV1 (prostate carcinoma)
ASB for transcription factors
SPI1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.75 0.25 0.021.00 2.00 n/a No Hit
ANDR_HUMAN 2.06 -0.27 0.040.96 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  body mass index (bmi),  diastolic blood pressure (dbp),  height,  ldl cholesterol,  lung function, forced expiratory volume in 1 second (fev1),  obesity (body mass index (bmi)),  systolic blood pressure (sbp),  total cholesterol,  waist hip ratio

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