rs2710867 chr1:998719 G>C

Sequence
aacccaacgcgggggcagagggcg[G/C]gtgcgcatgcggggctgcagggat
ASB in cell types
HEK293 (embryonic kidney) HepG2 (hepatoblastoma)
ASB for transcription factors
ZBT8A_HUMAN ZFX_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZBT8A_HUMAN n/a 1.72 1.000.01 2.00 n/a n/a
ZFX_HUMAN -1.94 2.89 1.000.04 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Muscle_Skeletal,  Spleen,  Thyroid,  Whole_Blood

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