rs2714702 chr7:79741890 G>A
- Sequence
atacagttcgggagatgaccactg[G/A]cctctggtgttacattttggacac
- ASB in cell types
- MS-1 (Small cell lung carcinoma) HUES64 (embryonic stem cells) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -3.61 | 2.86 | 1.50 | 0.90 | Weak Concordant | |||
| RAD21_HUMAN | -2.43 | 2.54 | 1.00 | n/a | n/a |
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Motif analysis
