rs271762 chr1:234534101 T>C
- Sequence
tgcgtggcagcagttcttagccaa[T/C]tcacattttttagcagttctggcc
- ASB in cell types
- SK-N-SH (neuroblastoma) BEAS-2B (bronchial epithelium)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| SK-N-SH (neuroblastoma) | 0.32 | 1.36 | 1.03 | |||
| BEAS-2B (bronchial epithelium) | 0.15 | 1.01 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Sun_Exposed_Lower_leg, Thyroid