rs2742677 chr1:3086046 C>T
- Sequence
ttggcctaagtcagtctcagaatg[C/T]gtacacagctgcaggcacacagac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.57 | 1.91 | 1.89 | n/a | No Hit | |||
| FOXA1_HUMAN | -1.66 | 2.46 | 2.00 | 4.97 | Concordant |
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Motif analysis
