rs274716 chr5:6722176 T>C

Sequence
catggtttctaacttgagcctcag[T/C]ttccccccctgtgaagcagagcct
ASB in cell types
ARP-1(Plasma cell myeloma)
ASB for transcription factors
IKZF1_HUMAN ERG_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -4.28 2.49 1.006.1·10-3 1.50 n/a No Hit
ERG_HUMAN -2.45 2.48 1.000.02 1.33 1.21 Weak Concordant
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Motif analysis

ERG_HUMAN Weak Concordant
ERG_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta Cells_EBV-transformed_lymphocytes Thyroid

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