rs275470 chr5:6837727 C>T
- Sequence
ccctctgctgacaaaactcagcac[C/T]gcaccagcgggtgaaggaggaacg
- ASB in cell types
- T47D (invasive ductal carcinoma) LNCaP (prostate carcinoma) ID00014 (lymphoblastoid cell, DiGeorge syndrome) WA09 (embryonic stem cells)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.95 | 0.24 | 1.48 | n/a | No Hit | |||
| RAD21_HUMAN | 1.62 | -0.33 | 1.33 | n/a | n/a |
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