rs2760491 chr1:58769564 T>C

Sequence
ttattttcttcacggactctttac[T/C]aattagtaaagagattatatagca
ASB in cell types
GM19238 (female B-cells lymphoblastoid cell lines)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.43 2.82 0.851.6·10-7 1.35 n/a No Hit
STAG1_HUMAN 1.21 2.77 1.007.8·10-3 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Testis

Download