ADASTRA v5.1.3
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rs276924
chr18:31042558
C
>
T
Sequence
tccagggcggatccacccccgtcc[C/T]caccccagccctatccggcgagat
ASB in cell types
HepG2 (hepatoblastoma)
HEK293 (embryonic kidney)
HCT-116 (colon carcinoma)
ASB for transcription factors
TYY1_HUMAN
PRDM9_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN
2.26
-4.33
1.0·10
-9
1.00
2.00
n/a
No Hit
PRDM9_HUMAN
1.33
n/a
0.02
1.00
3.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Nerve_Tibial
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)