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rs276924 chr18:31042558 C>T

Sequence
tccagggcggatccacccccgtcc[C/T]caccccagccctatccggcgagat
ASB in cell types
HepG2 (hepatoblastoma) HEK293 (embryonic kidney) HCT-116 (colon carcinoma)
ASB for transcription factors
TYY1_HUMAN PRDM9_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 2.26 -4.33 1.0·10-91.00 2.00 n/a No Hit
PRDM9_HUMAN 1.33 n/a 0.021.00 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Artery_Tibial Nerve_Tibial

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