rs2786808 chr1:16615533 G>A
- Sequence
ggtgggaggattgcttgagctcag[G/A]aggttgaggctgcagtgagccatg
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line) CD34+ bone marrow cell-derived erythroid progenitors
- ASB for transcription factors
- GATA1_HUMAN TYY1_HUMAN ZNF24_HUMAN ZN398_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | n/a | 3.33 | 1.50 | n/a | No Hit | |||
| TYY1_HUMAN | -2.26 | 3.06 | 2.00 | n/a | No Hit | |||
| ZNF24_HUMAN | -1.32 | 3.09 | 2.25 | n/a | n/a | |||
| ZN398_HUMAN | n/a | 3.35 | 2.00 | n/a | n/a | |||
| SMHD1_HUMAN | -2.75 | 2.65 | 1.00 | n/a | n/a |
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