rs278842 chr1:77704889 A>G

Sequence
ctctacccaggcagatacctttat[A/G]cttgctgcctggtacagtgcaaca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MTG16_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTG16_HUMAN n/a 1.38 1.000.03 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Brain_Frontal_Cortex_BA9 Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Muscularis Lung Muscle_Skeletal Testis

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