rs27931 chr5:62475217 T>A
- Sequence
caccttgtctggccaaaatagatt[T/A]aaaaaaaaagatttccctgaggcc
- ASB in cell types
- K562 (myelogenous leukemia) BIN-67 (Ovarian small cell carcinoma, hypercalcemic type) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
- ASB for transcription factors
- SMRC1_HUMAN ARI1B_HUMAN MTG8R_HUMAN ATF3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMRC1_HUMAN | n/a | 3.14 | 1.00 | n/a | n/a | |||
| ARI1B_HUMAN | n/a | 2.40 | 2.00 | n/a | n/a | |||
| MTG8R_HUMAN | n/a | 2.83 | 2.00 | n/a | n/a | |||
| ATF3_HUMAN | n/a | 2.41 | 2.00 | n/a | No Hit |
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