rs2794362 chr1:3518420 G>C
- Sequence
cccaggattctgccaaatgtgagg[G/C]tgaagctctgcaaaggtaaagggg
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.02 | 1.25 | 1.05 | n/a | n/a | |||
| TIF1B_HUMAN | -0.79 | 2.16 | 1.50 | n/a | n/a |
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