rs280045 chr17:33651869 G>T
- Sequence
gatgtgacaaaagagagtgaggtg[G/T]agaacacagtctccctctcctgga
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi) D54 (H54, Human glioblastoma) epithelial cell of prostate
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.55 | 1.69 | 1.43 | n/a | No Hit | |||
| STAG1_HUMAN | n/a | 2.76 | 1.00 | n/a | n/a |
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