rs2811937 chr1:23554819 G>A
- Sequence
gaaccgggaggccgcgctgctggc[G/A]gagcggcgggggcgccgcgaggct
- ASB in cell types
- MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) BIN-67 (Ovarian small cell carcinoma, hypercalcemic type) HCT-116 (colon carcinoma) foreskin keratinocyte
- ASB for transcription factors
- CDN1B_HUMAN TYY1_HUMAN SMRC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDN1B_HUMAN | 0.12 | 1.39 | 1.12 | n/a | n/a | |||
| TYY1_HUMAN | -0.52 | 1.44 | 2.00 | n/a | No Hit | |||
| SMRC1_HUMAN | 1.31 | 1.09 | 1.00 | n/a | n/a |
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