rs281437 chr19:10286562 C>T
- Sequence
tttttttttccagagacggggtct[C/T]gcaacattgcccagacttcctttg
- ASB in cell types
- HL-60 (acute myeloid leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- SKI_HUMAN ZN121_HUMAN ZN770_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SKI_HUMAN | 0.01 | 2.81 | 1.50 | n/a | n/a | |||
| ZN121_HUMAN | -3.97 | 2.32 | 1.50 | 0.04 | Weak Concordant | |||
| ZN770_HUMAN | -1.98 | 2.78 | 2.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP mitral annular calcium, plasma soluble intercellular adhesion molecule 1 (icam-1) (females), rheumatoid arthritis, soluble intercellular adhesion molecule 1 (icam-1), urinary albumin-to-creatinine ratio
PheWAS abnormal movement, abnormality of gait, alzheimers disease, anomalies of jaw size/symmetry, atrial flutter, bacterial enteritis, benign neoplasm of thyroid glands, cachexia, calculus of bile duct, calculus of lower urinary tract, cancer of the lower gi tract, carcinoma in situ of skin, chronic prostatitis, clotting factor deficiency, complication of internal orthopedic device, congenital coagulation defects, congenital musculoskeletal anomalies, deficiency anemias nos, delirium dementia and amnestic disorders, dementias, diseases of respiratory system, diseases of white blood cells, disorders of coccyx, disorders of menstruation, disorders of synovium, tendon, and bursa, disturbance of skin sensation, disturbances of sulphur-bearing amino-acid metabolism, dysmetabolic syndrome x, effects of radiation nos, encounter for long-term use of antiplatelets/antithrombotics, erectile dysfunction, femoral hernia, hematuria, hemorrhage nos, hereditary hemolytic anemias, hypopotassemia, irregular menstrual cycle, irregular menstrual cycle/bleeding, light-headedness and vertigo, localized adiposity, lymphadenitis, mitral stenosis/insufficiency, nervous system congenital anomalies, noninflammatory disorders of cervix, noninflammatory disorders of vulva and perineum, noninflammatory female genital disorders, orthostatic hypotension, other diseases of respiratory system, other disorders of back, other disorders of intestine, other disorders of soft tissues, other specified intestinal malabsorption, paralytic ileus, paroxysmal ventricular tachycardia, pneumonia, poisoning by agents affecting the cardiovascular system, poisoning by analgesics, antipyretics, and antirheumatics, polyarthropathy or polyarthritis involving multiple sites nos, polyp of corpus uteri, respiratory failure, reticulosarcoma, salicylates causing adverse effects in therapeutic use, sciatica, senile dementia, sinoatrial node dysfunction, symptoms affecting skin, unspecified polyarthropathy or polyarthritis, ventral hernia, vertiginous syndromes and other disorders of vestibular system
GTEx eQTL Adipose_Visceral_Omentum, Brain_Nucleus_accumbens_basal_ganglia, Heart_Left_Ventricle, Nerve_Tibial, Testis, Thyroid, Whole_Blood