rs2819875 chr10:80143761 C>T

Sequence
taattctatatgttttattttttg[C/T]atttaaggcattattctgagaaga
ASB in cell types
GM19238 (female B-cells lymphoblastoid cell lines)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM19238 (female B-cells lymphoblastoid cell lines) 0.77 -0.44 0.021.00 1.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Nucleus_accumbens_basal_ganglia Brain_Spinal_cord_cervical_c-1 Cells_Cultured_fibroblasts Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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