rs282135 chr6:89242511 G>T

Sequence
tgccctagtggcttttgtgatcaa[G/T]agacacaaactcattttggaagca
ASB in cell types
GM12890 (Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.99 -1.20 2.2·10-51.00 1.07 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP nicotine dependence (smoking) triglycerides
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Cells_Cultured_fibroblasts Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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