rs2835308 chr21:36188417 A>C

Sequence
tcaagctggcaaagcaaccgggtc[A/C]tgccatttcagtcaaggtggaatg
ASB in cell types
breast tumor pancreas 22RV1 (prostate carcinoma)
ASB for transcription factors
ESR1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 2.48 -0.85 5.3·10-71.00 2.00 n/a No Hit
ANDR_HUMAN 1.18 -0.08 0.041.00 1.51 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Coronary,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Heart_Left_Ventricle,  Muscle_Skeletal

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