rs28362548 chr3:130893987 G>A
- Sequence
gcacctctctcagcggaagtaata[G/A]tgacaaagctgggttcgcggctgg
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor macrophages form periferal blood
- ASB for transcription factors
- SPI1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.23 | 0.27 | 1.14 | n/a | No Hit | |||
| ESR1_HUMAN | 2.78 | -0.39 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Lung, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis