rs28413692 chr18:74480374 C>T

Sequence
aatacgtgactcaggatagcatgc[C/T]ccaaaattcacgtccacctggatt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
IKZF1_HUMAN ATF2_HUMAN ILF3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.71 2.38 1.001.5·10-4 1.00 n/a No Hit
ATF2_HUMAN -2.22 2.19 1.000.04 1.00 n/a No Hit
ILF3_HUMAN -1.21 1.76 1.000.05 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellum Brain_Nucleus_accumbens_basal_ganglia Esophagus_Mucosa Heart_Left_Ventricle Nerve_Tibial Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Testis Thyroid Whole_Blood

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