rs28445877 chr1:242017824 G>A
- Sequence
tgccctctgctgttcctcatgttg[G/A]ctacatcgagttactgcaaataga
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP clone FGC THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.35 | 1.74 | 1.78 | n/a | No Hit |
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