rs28464394 chr4:48342137 G>T
- Sequence
aggaggaggagagctggtgagcgc[G/T]aggcgccgggcaggagctgggcgg
- ASB in cell types
- SEM (childhood B acute lymphoblastic leukemia) primary B-CLL cells BEAS-2B (bronchial epithelium) K562 (myelogenous leukemia)
- ASB for transcription factors
- BRD4_HUMAN ESR1_HUMAN GCR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 1.96 | -0.55 | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 2.34 | 0.32 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.08 | 0.15 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Testis