rs28488583 chr7:36165513 G>A

Sequence
agctcactgcaacctctgcctccc[G/A]ggttcaagcgattctccttcctca
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN394_HUMAN ZN426_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN394_HUMAN n/a 2.92 1.001.8·10-3 1.00 n/a No Hit
ZN426_HUMAN -4.84 2.74 1.004.5·10-3 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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