rs28520549 chr4:182809170 G>A

Sequence
atgaagaggccccaggacgggaag[G/A]gggttgctctccctgcagccccca
ASB in cell types
hematopoietic stem cells and progenitors MDM(monocyte derived macrophages)
ASB for transcription factors
TF7L2_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF7L2_HUMAN 2.96 -2.95 1.1·10-31.00 1.00 n/a No Hit
TF65_HUMAN 2.09 n/a 0.041.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Spinal_cord_cervical_c-1

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