rs285206 chr20:43667902 C>T
- Sequence
ccccagcttggttcggtttgagac[C/T]tctcttcctgttcccacgaggagt
- ASB in cell types
- Mutu-1 (Epstein-Barr virus-related Burkitt lymphoma)
- ASB for transcription factors
- COE1_HUMAN FOXP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COE1_HUMAN | 1.55 | -0.28 | 1.17 | n/a | No Hit | |||
| FOXP1_HUMAN | 1.71 | -0.30 | 1.75 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, height, infant head circumference, microalbuminuria, refractive error, systolic blood pressure (sbp), urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cerebellum, Cells_EBV-transformed_lymphocytes, Esophagus_Muscularis, Nerve_Tibial, Pituitary, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid, Whole_Blood