rs285539 chr2:4674154 T>G
- Sequence
gctggagggaacaggaaataggtg[T/G]aagccccgcccccttctgagttgt
- ASB in cell types
- TMD8 (diffuse large B-cell lymphoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- GABPA_HUMAN ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | -0.68 | 1.85 | 2.00 | n/a | No Hit | |||
| ITF2_HUMAN | 2.37 | -4.60 | 2.00 | n/a | No Hit |
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