rs285614 chr6:90350907 A>G
- Sequence
tcctctgccaccagatgacgacat[A/G]cttgcttcctcttcacccttctgc
- ASB in cell types
- K562 (myelogenous leukemia) monocytes from periferal blood
- ASB for transcription factors
- ATF2_HUMAN ATF4_HUMAN ATF3_HUMAN CEBPG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 1.85 | n/a | 2.00 | -0.59 | Weak Concordant | |||
| ATF4_HUMAN | 2.80 | n/a | 2.00 | n/a | No Hit | |||
| ATF3_HUMAN | 1.81 | n/a | 2.00 | n/a | No Hit | |||
| CEBPG_HUMAN | 2.92 | n/a | 2.50 | n/a | No Hit | |||
| CREB1_HUMAN | 2.13 | -1.24 | 1.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP college completion, parkinsons disease, rheumatoid arthritis, serum creatinine, total cholesterol