rs2858483 chr22:37190632 A>C
- Sequence
tctgtttatatttgaaagcatgcc[A/C]ctcgagtcaaacccttgttaaata
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.69 | -0.54 | 1.31 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Pituitary, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood