ADASTRA v5.1.3
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Bill Cipher
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs286234
chr19:11798757
G
>
A
Sequence
gtgcccggcctagcgtccagatac[G/A]tggaagaggggctgggtggaacca
ASB in cell types
keratinocytes
spleen
ASB for transcription factors
CTCF_HUMAN
SNAI2_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
1.24
0.48
5.3·10
-3
1.00
1.20
n/a
No Hit
SNAI2_HUMAN
2.30
n/a
0.04
1.00
1.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adrenal_Gland
,
Artery_Tibial
,
Brain_Amygdala
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Pancreas
,
Spleen
,
Stomach
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)