rs286234 chr19:11798757 G>A

Sequence
gtgcccggcctagcgtccagatac[G/A]tggaagaggggctgggtggaacca
ASB in cell types
keratinocytes spleen
ASB for transcription factors
CTCF_HUMAN SNAI2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.24 0.48 5.3·10-31.00 1.20 n/a No Hit
SNAI2_HUMAN 2.30 n/a 0.041.00 1.50 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Adrenal_Gland,  Artery_Tibial,  Brain_Amygdala,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Pancreas,  Spleen,  Stomach,  Thyroid

Download