rs2862853 chr2:113069182 C>T
- Sequence
gagaagataagaaaggaattatgt[C/T]gccaggaggtgtggtttagtgtcc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HUES64 (embryonic stem cells)
- ASB for transcription factors
- GATA3_HUMAN RFX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | 1.89 | -0.10 | 2.40 | n/a | No Hit | |||
| RFX1_HUMAN | 2.02 | -3.87 | 3.75 | n/a | No Hit |
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